diff --git a/Dockerfile b/Dockerfile index 6cfdcd1..5137800 100644 --- a/Dockerfile +++ b/Dockerfile @@ -1,5 +1,103 @@ -FROM git.sandbox.iuk.hdm-stuttgart.de/grosse/jupyterlab-datascience:latest +FROM python:3.10.8-slim-bullseye +# debian:bullseye-20230109-slim +ARG NB_USER="jovyan" +ARG NB_UID="1000" +ARG NB_GID="100" -USER jovyan +RUN apt-get update --yes && \ + # - apt-get upgrade is run to patch known vulnerabilities in apt-get packages as + # the ubuntu base image is rebuilt too seldom sometimes (less than once a month) + apt-get upgrade --yes && \ + apt-get install --yes --no-install-recommends \ + # - bzip2 is necessary to extract the micromamba executable. + bzip2 \ + ca-certificates \ + locales \ + sudo \ + nano \ + build-essential \ + tini \ + wget && \ + apt-get clean && rm -rf /var/lib/apt/lists/* && \ + echo "en_US.UTF-8 UTF-8" > /etc/locale.gen && \ + locale-gen -RUN conda install -c conda-forge tensorflow-gpu=2.11 -y \ No newline at end of file + +# Configure environment +ENV CONDA_DIR=/opt/conda \ + SHELL=/bin/bash \ + NB_USER="${NB_USER}" \ + NB_UID=${NB_UID} \ + NB_GID=${NB_GID} \ + LC_ALL=en_US.UTF-8 \ + LANG=en_US.UTF-8 \ + LANGUAGE=en_US.UTF-8 +ENV PATH="${CONDA_DIR}/bin:${PATH}" \ + HOME="/home/${NB_USER}" + +# Copy a script that we will use to correct permissions after running certain commands +COPY fix-permissions /usr/local/bin/fix-permissions +RUN chmod a+rx /usr/local/bin/fix-permissions + +# Enable prompt color in the skeleton .bashrc before creating the default NB_USER +# hadolint ignore=SC2016 +RUN sed -i 's/^#force_color_prompt=yes/force_color_prompt=yes/' /etc/skel/.bashrc && \ + # Add call to conda init script see https://stackoverflow.com/a/58081608/4413446 + echo 'eval "$(command conda shell.bash hook 2> /dev/null)"' >> /etc/skel/.bashrc + +# Create NB_USER with name jovyan user with UID=1000 and in the 'users' group +# and make sure these dirs are writable by the `users` group. +RUN echo "auth requisite pam_deny.so" >> /etc/pam.d/su && \ + sed -i.bak -e 's/^%admin/#%admin/' /etc/sudoers && \ + sed -i.bak -e 's/^%sudo/#%sudo/' /etc/sudoers && \ + useradd -l -m -s /bin/bash -N -u "${NB_UID}" "${NB_USER}" && \ + mkdir -p "${CONDA_DIR}" && \ + chown "${NB_USER}:${NB_GID}" "${CONDA_DIR}" && \ + chmod g+w /etc/passwd && \ + fix-permissions "${HOME}" && \ + fix-permissions "${CONDA_DIR}" + +USER ${NB_UID} + +# Pin python version here, or set it to "default" +ARG PYTHON_VERSION=3.10 + +# Setup work directory for backward-compatibility +RUN mkdir "/home/${NB_USER}/work" && \ + fix-permissions "/home/${NB_USER}" + +COPY --chown="${NB_UID}:${NB_GID}" initial-condarc "${CONDA_DIR}/.condarc" +WORKDIR /tmp +RUN set -x && \ + arch=$(uname -m) && \ + if [ "${arch}" = "x86_64" ]; then \ + # Should be simpler, see + arch="64"; \ + fi && \ + wget -qO /tmp/micromamba.tar.bz2 \ + "https://micromamba.snakepit.net/api/micromamba/linux-${arch}/latest" && \ + tar -xvjf /tmp/micromamba.tar.bz2 --strip-components=1 bin/micromamba && \ + rm /tmp/micromamba.tar.bz2 && \ + PYTHON_SPECIFIER="python=${PYTHON_VERSION}" && \ + if [[ "${PYTHON_VERSION}" == "default" ]]; then PYTHON_SPECIFIER="python"; fi && \ + # Install the packages + ./micromamba install \ + --root-prefix="${CONDA_DIR}" \ + --prefix="${CONDA_DIR}" \ + --yes \ + "${PYTHON_SPECIFIER}" \ + 'mamba' \ + 'jupyter_core' && \ + rm micromamba && \ + # Pin major.minor version of python + mamba list python | grep '^python ' | tr -s ' ' | cut -d ' ' -f 1,2 >> "${CONDA_DIR}/conda-meta/pinned" && \ + mamba clean --all -f -y && \ + fix-permissions "${CONDA_DIR}" && \ + fix-permissions "/home/${NB_USER}" + +#RUN conda update --all --yes +#RUN conda install -c conda-forge tensorflow-gpu=2.11 -y + +#RUN CONDA_CUDA_OVERRIDE="11.2" mamba install --yes -c conda-forge tensorflow==2.10.0=cuda112py310* +ENV CONDA_CUDA_OVERRIDE="11.2" +RUN mamba install -y -c conda-forge tensorflow-gpu diff --git a/old/fix-permissions b/fix-permissions similarity index 100% rename from old/fix-permissions rename to fix-permissions diff --git a/old/initial-condarc b/initial-condarc similarity index 100% rename from old/initial-condarc rename to initial-condarc diff --git a/old/jupyter_server_config.py b/jupyter_server_config.py similarity index 100% rename from old/jupyter_server_config.py rename to jupyter_server_config.py diff --git a/old/start-notebook.sh b/start-notebook.sh similarity index 100% rename from old/start-notebook.sh rename to start-notebook.sh diff --git a/old/start-singleuser.sh b/start-singleuser.sh similarity index 100% rename from old/start-singleuser.sh rename to start-singleuser.sh